Queso Mac & Cheese with Chipotle and Avocado Recipe
Introduction
Queso Mac & Cheese is a creamy, cheesy twist on the classic macaroni and cheese, infused with smoky chipotle and topped with fresh avocado, pickled jalapeños, and cilantro. This comforting dish brings bold flavors and a velvety texture perfect for any occasion.

Ingredients
- 1/2 cup unsalted butter, plus more for pan
- Kosher salt
- 1 pound cavatappi, elbow, or other short, tube-shaped pasta
- 1/2 cup all-purpose flour
- 8 ounces cream cheese, room temperature
- 1 canned chipotle chile, finely chopped (optional), plus 2 to 4 ounces adobo sauce
- 1 teaspoon ground cumin
- Freshly ground black pepper
- 12 ounces sharp cheddar cheese, coarsely grated
- 12 ounces Monterey Jack cheese, coarsely grated
- Sliced avocado, pickled jalapeños, and chopped fresh cilantro, for serving
Instructions
- Step 1: Preheat the oven to 425°F (220°C). Grease a 13″ x 9″ baking pan or two 8″ x 5″ casserole dishes with butter.
- Step 2: Bring a large pot of salted water to a boil. Cook the pasta, stirring occasionally, until slightly firmer than al dente—about 2 minutes less than package directions. Reserve 4 cups of pasta water before draining. If needed, add water or milk to reach 4 cups liquid.
- Step 3: In the same pot over medium heat, melt the butter. Whisk in the flour and cook, whisking constantly, until the butter foams and turns golden brown, about 4 minutes. Slowly whisk in the reserved pasta water to prevent lumps. Add the cream cheese and whisk until smooth.
- Step 4: Stir in the chopped chipotle chile (if using), adobo sauce, and cumin. Season with salt and pepper. Bring to a simmer, whisking constantly. Gradually add the cheddar and Monterey Jack cheeses, about 1/2 cup at a time, whisking until each addition melts smoothly before adding more. Add the pasta, season again with salt and pepper, and toss to combine. Transfer the mixture to the prepared pan.
- Step 5: Place the pan on a foil-lined baking sheet and cover with foil. Bake for 30 minutes. Remove the foil and bake until the cheese bubbles and browns slightly, about 10 minutes more. Top with sliced avocado, pickled jalapeños, and chopped cilantro before serving.
Tips & Variations
- For a milder version, omit the chipotle chile and reduce or skip the adobo sauce.
- Use gluten-free flour and pasta to make this dish gluten-free.
- Add cooked bacon or chorizo for extra smoky flavor.
- Try topping with crushed tortilla chips for added crunch.
Storage
Store any leftovers in an airtight container in the refrigerator for up to 3 days. Reheat gently in the oven at 350°F (175°C) until warmed through, or microwave in short bursts, stirring occasionally to maintain creaminess.
How to Serve

Serve this delicious recipe with your favorite sides.
FAQs
Can I make Queso Mac & Cheese ahead of time?
Yes, you can assemble the dish in advance and refrigerate it before baking. When ready, bake as instructed, adding a few extra minutes if baking from cold.
What can I substitute for chipotle chile if I don’t have it?
You can use smoked paprika or a small amount of chili powder for a milder smoky flavor, or omit it entirely for a classic cheesy taste.
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Queso Mac & Cheese with Chipotle and Avocado Recipe
- Total Time: 1 hour
- Yield: 8 servings 1x
Description
This Queso Mac & Cheese recipe is a creamy, cheesy pasta dish with a smoky chipotle kick. Made with a blend of sharp cheddar and Monterey Jack cheeses, cream cheese, and optional chipotle chile for heat, it’s baked to bubbly perfection and topped with fresh avocado, pickled jalapeños, and cilantro for a vibrant finish. Perfect for a comforting family meal or a flavorful twist on classic mac and cheese.
Ingredients
Pasta
- 1 lb. cavatappi, elbow, or other short, tube-shaped pasta
- Kosher salt, for boiling water
Cheese Sauce
- 1/2 cup unsalted butter, plus more for greasing pan
- 1/2 cup all-purpose flour
- 8 oz. cream cheese, room temperature
- 1 canned chipotle chile, finely chopped (optional)
- 2 to 4 oz. adobo sauce (depending on heat preference)
- 1 tsp. ground cumin
- Freshly ground black pepper, to taste
- 12 oz. sharp cheddar cheese, coarsely grated
- 12 oz. Monterey Jack cheese, coarsely grated
Toppings
- Sliced avocado, for serving
- Pickled jalapeños, for serving
- Chopped fresh cilantro, for serving
Instructions
- Preheat and prepare pan: Preheat your oven to 425°F (220°C). Grease a 13″ x 9″ baking pan or two 8″ x 5″ casserole dishes thoroughly with butter to prevent sticking.
- Cook pasta: Bring a large pot of salted water to a boil. Add the pasta and cook, stirring occasionally, until it is slightly firmer than al dente—about 2 minutes less than the package instructions recommend. Reserve 4 cups of the pasta cooking water before draining the pasta. If you do not have enough reserved water, add water or milk to reach 4 cups of liquid.
- Make the roux and cheese sauce base: In the same pot, melt 1/2 cup unsalted butter over medium heat. Whisk in the flour and cook continuously, whisking, until the mixture foams and turns golden brown, about 4 minutes. Slowly whisk in the reserved pasta water a little at a time to avoid lumps. Add the room temperature cream cheese and whisk until the sauce is completely smooth.
- Add flavor and melt cheeses: Stir in the finely chopped chipotle chile (if using), adobo sauce, and ground cumin. Season the sauce with kosher salt and freshly ground black pepper to taste. Bring the sauce to a gentle simmer while whisking constantly. Gradually add the shredded sharp cheddar and Monterey Jack cheeses, about 1/2 cup at a time, whisking until each batch melts completely and the sauce is smooth before adding more.
- Combine pasta and sauce: Add the cooked pasta back into the pot with the cheese sauce. Season again with salt and pepper to taste. Stir well to ensure every piece of pasta is coated with cheesy goodness. Transfer the mixture evenly into the prepared baking pan(s).
- Bake the mac and cheese: Place the baking dish on a foil-lined baking sheet to catch any drips. Cover the pan tightly with foil and bake in the preheated oven for 30 minutes. Then, remove the foil and continue baking for an additional 10 minutes until the cheese is bubbling and slightly golden on top.
- Add toppings and serve: Remove the dish from the oven and let it cool slightly. Top with sliced avocado, pickled jalapeños, and chopped fresh cilantro before serving to add freshness, creaminess, and a touch of heat.
Notes
- If you prefer a milder dish, omit the chipotle chile and adobo sauce, or reduce the amount used.
- Use freshly shredded cheese rather than pre-shredded for better melting and creamier sauce.
- Reserve enough pasta water as it contains starch which helps to thicken the sauce and bind it to the noodles.
- Make sure the cream cheese is at room temperature to avoid lumps in the sauce.
- You can prepare this dish a day ahead, refrigerate, and bake just before serving—add a little more liquid if the sauce thickens too much in the fridge.
- Prep Time: 15 minutes
- Cook Time: 45 minutes
- Category: Main Course
- Method: Baking
- Cuisine: American
Keywords: mac and cheese, queso mac and cheese, baked mac and cheese, cheesy pasta, chipotle mac and cheese, comfort food, creamy mac and cheese

